The detailed information of tRNA gene sequence


Sequence ID>WENV170695499
Genome IDLGVE01107001
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 592
End posion on genome 500
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcggaataat
tRNA gene sequence 
GGAGAGGTTGCCGAGTGGCTGAAGGCCCCGCTCTCGAAAAGCGGTATTCTGTTATAACCA
GGATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaataaaaga
Secondary structure (Cloverleaf model)
>WENV170695499	Ser	CGA
                   t      GCCA gaataaaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        T      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        C     TATTCTGTTATAACCAGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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