The detailed information of tRNA gene sequence


Sequence ID>WENV170695502
Genome IDLGVE01107919
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 433
End posion on genome 356
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattacaaag
tRNA gene sequence 
GGGCCCGTAGCTTAGTACGGTTAGAGCGCCCGGCTCATAACCGGGCGGCCAAGGGTTCAA
ATCCCTTCGGGCCCACTA
Downstream region at tRNA end position 
taaacccttt
Secondary structure (Cloverleaf model)
>WENV170695502	Met	CAT
                   g      ACTA taaacccttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    A T G A        A      | | | | |     A
  C         T T C G       A A G G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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