The detailed information of tRNA gene sequence


Sequence ID>WENV170695503
Genome IDLGVE01108058
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 175
End posion on genome 250
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tatcggacag
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
ttttacattt
Secondary structure (Cloverleaf model)
>WENV170695503	Ala	GGC
                   g      ACCA ttttacattt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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