The detailed information of tRNA gene sequence


Sequence ID>WENV170695557
Genome IDLGVE01121374
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 5890
End posion on genome 5818
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
atctcacagg
tRNA gene sequence 
GGGCCCGTGGTCTAGTTGGAATGACGTCGCCTTGACAAGGCGGAGGTCATGCGTTCGAAT
CGCATCGGGCCCAtta
Downstream region at tRNA end position 
cttaggcagt
Secondary structure (Cloverleaf model)
>WENV170695557	Val	GAC
                   g      Atta cttaggcagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      T G A        G      | | | | |     G
    T       T C T G       A T G C G     C
    G         | | |                 T T
    G       T G A C
      A A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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