The detailed information of tRNA gene sequence


Sequence ID>WENV170695673
Genome IDLGVE01150887
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1199
End posion on genome 1271
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gattctttat
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCAGACGCGGCTGACTGCAGATCAGCTTTATCCCGGTTCAATT
CCGGGCCTTGGCTtcc
Downstream region at tRNA end position 
ttggcgtcag
Secondary structure (Cloverleaf model)
>WENV170695673	Cys	GCA
                   t      Ttcc ttggcgtcag
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T T
                    T     G G G C C     A
      C G A        G      | | | | |     A
    G       G G C G       C C C G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TTTAT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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