The detailed information of tRNA gene sequence


Sequence ID>WENV170695690
Genome IDLGVE01154669
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1300
End posion on genome 1376
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attcggtctt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCGCCTGGTTTGGGACCAGGATGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttttacaca
Secondary structure (Cloverleaf model)
>WENV170695690	Pro	TGG
                   t      ACCA tttttacaca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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