The detailed information of tRNA gene sequence


Sequence ID>WENV170695724
Genome IDLGVE01160073
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 734
End posion on genome 658
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGCGATGTAGCTCAGTTGGTTAGAGCATACGGCTCATATCCGTAGTGTCCGGGGTTCAAC
TCCCTGCATCGCCACCA
Downstream region at tRNA end position 
tctttactta
Secondary structure (Cloverleaf model)
>WENV170695724	Met	CAT
                   n      ACCA tctttactta
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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