The detailed information of tRNA gene sequence


Sequence ID>WENV170695727
Genome IDLGVE01161164
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 487
End posion on genome 561
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cccaccttaa
tRNA gene sequence 
GGGGCCGTAGGGTAGCCTGGACCATCCTGCAAGGCTGGGGGTCTTGTGACCGGAGTTCGA
ATCTCCGCGGCCCCAttt
Downstream region at tRNA end position 
actcaggcac
Secondary structure (Cloverleaf model)
>WENV170695727	Pro	GGG
                   a      Attt actcaggcac
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C G G A G     C
  G           | | +                 T T
  G         T C C T
    A C C A        G     TGAC
                    C - G
                    A - T
                    A - T
                    G - C
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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