The detailed information of tRNA gene sequence


Sequence ID>WENV170695748
Genome IDLGVE01166435
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1183
End posion on genome 1109
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atagaacgta
tRNA gene sequence 
GGGGTCGTGGCCTAGTCCGGAAGGGCAGCGGGCTCCAGACTCGCCGATCGTGCGTTCAAA
TCGCACCGACCCCACtt
Downstream region at tRNA end position 
aattttttgt
Secondary structure (Cloverleaf model)
>WENV170695748	Trp	CCA
                   a      ACtt aattttttgt
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C G C     A
      T G A        G      | | | | |     A
    C       T C C G       G T G C G     C
    C       + | | |                 T T
    G       G G G C
      G A A        A     CGATC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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