The detailed information of tRNA gene sequence


Sequence ID>WENV170695830
Genome IDLGVE01179606
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 346
End posion on genome 421
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatatttcg
tRNA gene sequence 
GGCGGTGTAGCTCAGGGGTTAGAGCACACGGTTCATACCCGTGGGGTCATTGGTTCAAAT
CCAATCACCGCTACCA
Downstream region at tRNA end position 
tatttgaaat
Secondary structure (Cloverleaf model)
>WENV170695830	Met	CAT
                   g      ACCA tatttgaaat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T A A C C     A
      G G A        A      | | | | |     A
    G       C T C G       A T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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