The detailed information of tRNA gene sequence


Sequence ID>WENV170695871
Genome IDLGVE01183785
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 5515
End posion on genome 5591
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tctgcctttc
tRNA gene sequence 
GGCTCCGTAGCTCAGCTGGATAGAGCAACCGCCTCCTAAGCGGTAGGCCGGGCGTTCGAA
TCGCCCCGGGGCCGCCA
Downstream region at tRNA end position 
aatattaagg
Secondary structure (Cloverleaf model)
>WENV170695871	Arg	CCT
                   c      GCCA aatattaagg
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C G C     A
      C G A        A      | | | | |     G
    T       C T C G       G G G C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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