The detailed information of tRNA gene sequence


Sequence ID>WENV170695950
Genome IDLGVE01190663
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 4220
End posion on genome 4134
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nnnnaaatta
tRNA gene sequence 
GCCCGGGTGGCGGAACTGGTAGACGCAAGGGACTTAAAATCCCTCGGGAGTAATCCTGTA
CGAGTTCGATTCTCGTCCCGGGTACCA
Downstream region at tRNA end position 
tattgaatca
Secondary structure (Cloverleaf model)
>WENV170695950	Leu	TAA
                   a      ACCA tattgaatca
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     T G C T C     A
      C A A        G      | | | | |     G
    T       G G C G       A C G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGGAGTAATCCTGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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