The detailed information of tRNA gene sequence


Sequence ID>WENV170696015
Genome IDLGVE01197153
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1266
End posion on genome 1179
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taaaataaat
tRNA gene sequence 
GGAGGGGTGTCCGAGAGGCCGAAGGTGACAGACTCGAAATCTGTTGTGGCGCAAGCCACC
GGGAGTTCGAATCTCCCCCCCTCCGCCA
Downstream region at tRNA end position 
gtaaagaaaa
Secondary structure (Cloverleaf model)
>WENV170696015	Ser	CGA
                   t      GCCA gtaaagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      A G A        G      | | | | |     G
    G       G C C T       G G G A G     C
    G         | |                   T T
    C       A G G T
      C G A        G     TGTGGCGCAAGCCACC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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