The detailed information of tRNA gene sequence


Sequence ID>WENV170696033
Genome IDLGVE01200354
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 11
End posion on genome 87
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccacattagt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCTGGTAGCGCGACGGTTTTGGGTACCGTAGGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttcaaaaat
Secondary structure (Cloverleaf model)
>WENV170696033	Pro	TGG
                   t      ACCA tttcaaaaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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