The detailed information of tRNA gene sequence


Sequence ID>WENV170696077
Genome IDLGVE01211705
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1042
End posion on genome 1127
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaaagttgc
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGCTTAAGGCGGCGGTCTTGAAAACCGTTGTACGCAAGTACCGT
GGGTTCAAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
tttacacagc
Secondary structure (Cloverleaf model)
>WENV170696077	Ser	TGA
                   c      GCCA tttacacagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTACGCAAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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