The detailed information of tRNA gene sequence


Sequence ID>WENV170696172
Genome IDLGVF01000217
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1651
End posion on genome 1722
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gatcttttcg
tRNA gene sequence 
GGGCTCGTAGATCAGTGGAAGATCGTCTCCTTTGCGAGGAGAAGGCCCTGGGTTCAAATC
CCAGCGAGTCCAtat
Downstream region at tRNA end position 
tgtactgtan
Secondary structure (Cloverleaf model)
>WENV170696172	Ala	TGC
                   g      Atat tgtactgtan
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C C C     A
        G A        A      | | | | |     A
      T     C T A G       C T G G G     C
      G     | | | |                 T T
      G     G A T C
        A A        G     AGGCC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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