The detailed information of tRNA gene sequence


Sequence ID>WENV170696220
Genome IDLGVF01004168
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 778
End posion on genome 704
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acattctttT
tRNA gene sequence 
GGTCCCATCGTCTAGCGGTTTAGGATGTCGGCCTCTCACGCCGGAGACACGGGTTCGATT
CCCGTTGGGACTATtt
Downstream region at tRNA end position 
aactatagat
Secondary structure (Cloverleaf model)
>WENV170696220	Glu	CTC
                   T      ATtt aactatagat
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | +                 T T
    T       G G A T
      T T A        G     AGAC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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