The detailed information of tRNA gene sequence


Sequence ID>WENV170696265
Genome IDLGVF01008597
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 3100
End posion on genome 3193
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccggaatccc
tRNA gene sequence 
GGAGAGATGTCCGAGCTGGTTGAAGGAGCACGACTGGAAATCGTGTGTACTGCCAAAAGC
GGTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaaacttca
Secondary structure (Cloverleaf model)
>WENV170696265	Ser	GGA
                   c      GCCA aaaaacttca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  T         A G G A
    T G A          G     TGTACTGCCAAAAGCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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