The detailed information of tRNA gene sequence


Sequence ID>WENV170696270
Genome IDLGVF01008868
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 24177
End posion on genome 24268
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtggagtta
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCCGATGGTGCTCGCCTGCTAAGCGAGTGTGGGGGTTAGACTC
CACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
caaagataaa
Secondary structure (Cloverleaf model)
>WENV170696270	Ser	GCT
                   a      GCCA caaagataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTGGGGGTTAGACTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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