The detailed information of tRNA gene sequence


Sequence ID>WENV170696273
Genome IDLGVF01009007
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 454
End posion on genome 378
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccttgctga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCGAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
aatatttatc
Secondary structure (Cloverleaf model)
>WENV170696273	Met	CAT
                   a      ACCA aatatttatc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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