The detailed information of tRNA gene sequence


Sequence ID>WENV170696277
Genome IDLGVF01009086
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 6752
End posion on genome 6675
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtgttctttt
tRNA gene sequence 
GGGGGCGTAGTTCAGTTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGA
GTCTCGTCGTCCCCGCCA
Downstream region at tRNA end position 
tgtaatatca
Secondary structure (Cloverleaf model)
>WENV170696277	Asp	GTC
                   t      GCCA tgtaatatca
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G A G     C
  G         | | | |                 T T
  G         G A A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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