The detailed information of tRNA gene sequence


Sequence ID>WENV170696302
Genome IDLGVF01010529
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 99
End posion on genome 2
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcttcataat
tRNA gene sequence 
GGAAGTGGATAGCTCACTGGTGGAGCTCCCGGACTTCAAATCCGGTGTGGGGCGTTAACA
CCGTCTCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170696302	SeC(p)	TCA
                   t      GCCA annnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        T      + | | | |     G
    T       T C G A       G T G G G     C
    G       | | | |                 T T
    G       A G C T
      T G G        C     TGTGGGGCGTTAACACCGTCTCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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