The detailed information of tRNA gene sequence


Sequence ID>WENV170696350
Genome IDLGVF01013456
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 147
End posion on genome 240
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaagaacccc
tRNA gene sequence 
GGAGAGATGTCCGAGCTGGTTGAAGGAGCACGACTGGAAATCGTGTGTACTGTCAAAAGC
GGTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ggaatttttt
Secondary structure (Cloverleaf model)
>WENV170696350	Ser	GGA
                   c      GCCA ggaatttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  T         A G G A
    T G A          G     TGTACTGTCAAAAGCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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