The detailed information of tRNA gene sequence


Sequence ID>WENV170696355
Genome IDLGVF01013715
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 519
End posion on genome 604
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagaaagacc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGAGCGAAAGCTCCGT
GGGTTCAAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
ggtnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170696355	Ser	TGA
                   c      GCCA ggtnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGAGCGAAAGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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