The detailed information of tRNA gene sequence


Sequence ID>WENV170696435
Genome IDLGVF01017174
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 365
End posion on genome 438
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atcccccaat
tRNA gene sequence 
GGCTGGGTGGCAGAGTGGTTATGCACCGGCCTGCAAAGCCGTGTACCTCGGTTCGATTCC
GGGCCCAGCCTCCA
Downstream region at tRNA end position 
ttttatatcg
Secondary structure (Cloverleaf model)
>WENV170696435	Cys	GCA
                   t      TCCA ttttatatcg
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T T
                    T     G G G C C     A
        G A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAC
                    C   T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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