The detailed information of tRNA gene sequence


Sequence ID>WENV170696499
Genome IDLGVF01022204
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2645
End posion on genome 2568
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agacttcatt
tRNA gene sequence 
GGGGGCGTAGTTCAGTTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGA
GTCTCGTCGCTCCCGCCA
Downstream region at tRNA end position 
aacaaaatca
Secondary structure (Cloverleaf model)
>WENV170696499	Asp	GTC
                   t      GCCA aacaaaatca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G A G     C
  G         | | | |                 T T
  G         G A A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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