The detailed information of tRNA gene sequence


Sequence ID>WENV170696523
Genome IDLGVF01024378
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 676
End posion on genome 601
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caaaacacaa
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGCAGAGCAGTTGACTCTTAATCAATTGGTCGGAGGTTCGAAC
CCTCTCAGGCCTACCA
Downstream region at tRNA end position 
ttaaattctt
Secondary structure (Cloverleaf model)
>WENV170696523	Lys	CTT
                   a      ACCA ttaaattctt
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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