The detailed information of tRNA gene sequence


Sequence ID>WENV170696566
Genome IDLGVF01028585
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1620
End posion on genome 1533
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaaattga
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGAGTGTCACAGCTCC
GTGGGTTCAAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
gaagatttaa
Secondary structure (Cloverleaf model)
>WENV170696566	Ser	TGA
                   a      GCCA gaagatttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGAGTGTCACAGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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