The detailed information of tRNA gene sequence


Sequence ID>WENV170696570
Genome IDLGVF01028658
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 877
End posion on genome 964
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaaaattgc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGAGTGTCACAGCTCC
GTGGGTTCAAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
tattttaata
Secondary structure (Cloverleaf model)
>WENV170696570	Ser	TGA
                   c      GCCA tattttaata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGAGTGTCACAGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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