The detailed information of tRNA gene sequence


Sequence ID>WENV170696571
Genome IDLGVF01028658
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1072
End posion on genome 1164
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctataaattt
tRNA gene sequence 
GGAGAGATGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTGTGGGGTGAAAACT
CCACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atcttattat
Secondary structure (Cloverleaf model)
>WENV170696571	Ser	GCT
                   t      GCCA atcttattat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTGGGGTGAAAACTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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