The detailed information of tRNA gene sequence


Sequence ID>WENV170696579
Genome IDLGVF01029606
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1964
End posion on genome 1887
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cctaccattt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTTGGTTAGAGCGCCGGCCTGTCAAGCCGGAGGTCGCGAGTTCAA
GTCTCGTCACTCCCGCCA
Downstream region at tRNA end position 
tacaaataaa
Secondary structure (Cloverleaf model)
>WENV170696579	Asp	GTC
                   t      GCCA tacaaataaa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     A
  T         C T C G       G C G A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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