The detailed information of tRNA gene sequence


Sequence ID>WENV170696592
Genome IDLGVF01031638
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 5373
End posion on genome 5470
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctgtgactgc
tRNA gene sequence 
GGAAGTGGATAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAAAA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tctcttcttg
Secondary structure (Cloverleaf model)
>WENV170696592	SeC(p)	TCA
                   c      GCCA tctcttcttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        T      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGGGGCGCTAAAACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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