The detailed information of tRNA gene sequence


Sequence ID>WENV170696593
Genome IDLGVF01031850
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 10781
End posion on genome 10706
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttatgattac
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGTAGAGCAACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctattcgatg
Secondary structure (Cloverleaf model)
>WENV170696593	Trp	CCA
                   c      GCCA ctattcgatg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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