The detailed information of tRNA gene sequence


Sequence ID>WENV170696642
Genome IDLGVF01036894
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 11321
End posion on genome 11247
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatatcaaag
tRNA gene sequence 
GGGCCCGTAGCTTAGTACGGTTAGAGCGCCCGGCTCATAACCGGGCGGCCAAGGGTTCAA
ATCCCTTCGGGCCCAtta
Downstream region at tRNA end position 
tagccccatt
Secondary structure (Cloverleaf model)
>WENV170696642	Met	CAT
                   g      Atta tagccccatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    A T G A        A      | | | | |     A
  C         T T C G       A A G G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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