The detailed information of tRNA gene sequence


Sequence ID>WENV170696659
Genome IDLGVF01039094
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 6058
End posion on genome 5965
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtggaattgc
tRNA gene sequence 
GGAGAGATGTCCGAGCTGGCTGAAGGAGCACGACTGGAAATCGTGTGTACTGCCAAAAGC
GGTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gaatatttag
Secondary structure (Cloverleaf model)
>WENV170696659	Ser	GGA
                   c      GCCA gaatatttag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTACTGCCAAAAGCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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