The detailed information of tRNA gene sequence


Sequence ID>WENV170696785
Genome IDLGVF01049467
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1370
End posion on genome 1297
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaatcaaata
tRNA gene sequence 
GGGCTCGTGGTCTAGTTGGTTATGACGTCGCCTTCACACGGCGGAGGTCCGGAGTTCGAA
TCTCCGCGGGCCCAtcc
Downstream region at tRNA end position 
aggctaagag
Secondary structure (Cloverleaf model)
>WENV170696785	Val	CAC
                   a      Atcc aggctaagag
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G C C T C     A
      T G A        G      | | | | |     G
    T       T C T G       C G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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