The detailed information of tRNA gene sequence


Sequence ID>WENV170696834
Genome IDLGVF01053501
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 5321
End posion on genome 5397
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaaattgtt
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
gtaaattcaa
Secondary structure (Cloverleaf model)
>WENV170696834	Asp	GTC
                   t      GCCA gtaaattcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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