The detailed information of tRNA gene sequence


Sequence ID>WENV170696898
Genome IDLGVF01059848
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 27157
End posion on genome 27232
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcgcaaatat
tRNA gene sequence 
CGCGGGGTAGAGCAGTAGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCTGGTTCGAGT
CCAGTCCCCGCTACTA
Downstream region at tRNA end position 
aatttttgtt
Secondary structure (Cloverleaf model)
>WENV170696898	Met	CAT
                   t      ACTA aatttttgtt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G A C C     A
      T G A        A      + | | | |     G
    A       C G A G       G C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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