The detailed information of tRNA gene sequence


Sequence ID>WENV170696901
Genome IDLGVF01059848
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 27664
End posion on genome 27739
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taagatacat
tRNA gene sequence 
CGCGGGGTAGAGCAGTAGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCTGGTTCGAGT
CCAGTCCCCGCTACTA
Downstream region at tRNA end position 
agattttgtt
Secondary structure (Cloverleaf model)
>WENV170696901	Met	CAT
                   t      ACTA agattttgtt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G A C C     A
      T G A        A      + | | | |     G
    A       C G A G       G C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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