The detailed information of tRNA gene sequence


Sequence ID>WENV170696955
Genome IDLGVF01065678
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1174
End posion on genome 1098
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnac
tRNA gene sequence 
GGACCGGTAGTTCAGCTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAA
TCCCGTCCGGTCCGCCA
Downstream region at tRNA end position 
tatttaagac
Secondary structure (Cloverleaf model)
>WENV170696955	Asp	GTC
                   c      GCCA tatttaagac
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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