The detailed information of tRNA gene sequence


Sequence ID>WENV170696977
Genome IDLGVF01069247
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 879
End posion on genome 803
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atacatctgc
tRNA gene sequence 
AGGCCAGTAGCTCCAACGGTTAGAGCACCGGACTCCAAATCCGGGTGGTGTGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
acgtatattt
Secondary structure (Cloverleaf model)
>WENV170696977	Trp	CCA
                   c      GCCA acgtatattt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A C        A      |   | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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