The detailed information of tRNA gene sequence


Sequence ID>WENV170697095
Genome IDLGVF01080705
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1044
End posion on genome 1131
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttttttag
tRNA gene sequence 
GGAGGGATGGCCGAGTGGCTTAAGGCGGCGGTCTTGAAAACCGTTGAGTGTCAAAGCTCC
GTGGGTTCAAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
tttgagacat
Secondary structure (Cloverleaf model)
>WENV170697095	Ser	TGA
                   g      GCCA tttgagacat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGAGTGTCAAAGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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