The detailed information of tRNA gene sequence


Sequence ID>WENV170697170
Genome IDLGVF01089027
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2825
End posion on genome 2751
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acataatcga
tRNA gene sequence 
GCTCCGCTGGTGTAGTTCGGCCAAGCATGCGGGCCTCTCGAGCCCACGACCGGGGTTCAA
ATCCCCGGCGGAGCAtta
Downstream region at tRNA end position 
cttttttttt
Secondary structure (Cloverleaf model)
>WENV170697170	Glu	CTC
                   a      Atta cttttttttt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G          T A
                    T     G C C C C     A
    T T G A        G      | | | | |     A
  C         T G T G       C G G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        G     CGAC
                    C   A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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