The detailed information of tRNA gene sequence


Sequence ID>WENV170697199
Genome IDLGVF01093086
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 931
End posion on genome 1028
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaaaatcagg
tRNA gene sequence 
GGAAGTGGATAGGGCACTGGTGGCCCTCCCGGACTTCAAATCCGGTGCAAGGGGTTAATA
GCCTCTTGGGTGAGTTCGATTCTCATGCACTTCCGCCA
Downstream region at tRNA end position 
gacatctcaa
Secondary structure (Cloverleaf model)
>WENV170697199	SeC	TCA
                   g      GCCA gacatctcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C T C     A
      C A C        T      + | | | |     G
    T       G G G A       G T G A G     C
    G       | | | |                 T T
    G       C C C T
      T G G        C     TGCAAGGGGTTAATAGCCTCTTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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