The detailed information of tRNA gene sequence


Sequence ID>WENV170697284
Genome IDLGVF01105923
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1623
End posion on genome 1536
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtgtgaggT
tRNA gene sequence 
GCCAGGGTGGCAGAGCGGACAAATGCGGTGGCCTCGAGAGCCATTGTCCCGTAAGGGGCG
CTCAGGTTCAAATCCTGACCCTGGCGGtc
Downstream region at tRNA end position 
tctgcgtggt
Secondary structure (Cloverleaf model)
>WENV170697284	Ser	CGA
                   T      GGtc tctgcgtggt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     A G T C C     A
      C G A        G      | | | | |     A
    G       G A C G       T C A G G     C
    G         | | |                 T T
    A       A T G C
      C A A        G     TGTCCCGTAAGGGGCGC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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