The detailed information of tRNA gene sequence


Sequence ID>WENV170697290
Genome IDLGVF01106985
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1336
End posion on genome 1260
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatggcgatt
tRNA gene sequence 
GGCGATGTAGCTCAGTTGGTTAGAGCATACGGCTCATATCCGTAGTGTCCGGGGTTCAAC
TCCCTGCATCGCCACCA
Downstream region at tRNA end position 
tctttactta
Secondary structure (Cloverleaf model)
>WENV170697290	Met	CAT
                   t      ACCA tctttactta
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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