The detailed information of tRNA gene sequence


Sequence ID>WENV170697333
Genome IDLGVF01117182
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1485
End posion on genome 1577
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tctgggtgct
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTTAAGGCCCCGCTCTCGAAAAGCGGTATCCTGTCAAAAACG
GGATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttatttcag
Secondary structure (Cloverleaf model)
>WENV170697333	Ser	CGA
                   t      GCCA tttatttcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        C     TATCCTGTCAAAAACGGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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