The detailed information of tRNA gene sequence


Sequence ID>WENV170697349
Genome IDLGVF01119949
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 25116
End posion on genome 25207
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tggcataaat
tRNA gene sequence 
GGAGTAGTACTCAAGTTGGCTGAAGAGGTGCCCCTGCTAAGGGTATAGGTCGTTCGCGCG
GCGCGAGAGTTCGAATCTCTCCTACTCCGCCA
Downstream region at tRNA end position 
ttaaaaaata
Secondary structure (Cloverleaf model)
>WENV170697349	Ser	GCT
                   t      GCCA ttaaaaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C T C T C     A
    T T G A        A      | | | | |     G
  G         A C T C       G A G A G     C
  G           | | |                 T T
  C         A G A G
    T G A          G     TAGGTCGTTCGCGCGGCGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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