The detailed information of tRNA gene sequence


Sequence ID>WENV170697474
Genome IDLGVF01140470
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 648
End posion on genome 736
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcttaggtaa
tRNA gene sequence 
GGAGGGGTGCCAGAGTGGCCGATTGGGGCGGTCTCGAAAATCGTTGTGGCCTTATGGGTC
ACCGTGGGTTCGAATCCCACCCCCTCCGCtc
Downstream region at tRNA end position 
caatccccat
Secondary structure (Cloverleaf model)
>WENV170697474	Ser	CGA
                   a      GCtc caatccccat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    C       T T G G
      C G A        G     TGTGGCCTTATGGGTCACC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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