The detailed information of tRNA gene sequence


Sequence ID>WENV170697564
Genome IDLGVF01154848
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1026
End posion on genome 1102
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cctaatattt
tRNA gene sequence 
CGGGGTGTAGCGCAGTTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCGGGTTCAAA
TCCTGCCACCCCGACCA
Downstream region at tRNA end position 
ttttgtgggc
Secondary structure (Cloverleaf model)
>WENV170697564	Pro	TGG
                   t      ACCA ttttgtgggc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C G C G       G C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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